BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008C10LP1|AL425838
(870 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1783 1707 0.0
>3x_Contig1783
Length = 22123
Score = 1707 bits (859), Expect = 0.0
Identities = 865/869 (99%)
Strand = Plus / Minus
Query: 1 actaattgctttatctggaataacaacagcagctgatgctgatcaatataaaaaggaagg 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 18469 actaattgctttatctggaataacaatagcagctgatgctgatcaatataaaaaggaagg 18410
Query: 61 tgttcatggtgttcttgttggagaagctctcatgagagctgaatctgtaaataaattcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18409 tgttcatggtgttcttgttggagaagctctcatgagagctgaatctgtaaataaattcat 18350
Query: 121 cgaggagctaatcaactaatgataccagtccatttcatccttcgttatgtatgtatccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18349 cgaggagctaatcaactaatgataccagtccatttcatccttcgttatgtatgtatccac 18290
Query: 181 caacttgtaatgattgtatttctgtaattttagatatagacgttaaagtaagaatgatac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18289 caacttgtaatgattgtatttctgtaattttagatatagacgttaaagtaagaatgatac 18230
Query: 241 agatactataaattcaaaaggtatygaacattaaaactgggaagaagaagtcataaaagt 300
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 18229 agatactataaattcaaaaggtatcgaacattaaaactgggaagaagaagtcataaaagt 18170
Query: 301 agaaacgtcatggagtaaataaacatgaaaatgaaagctctatacattaaggaatgttca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18169 agaaacgtcatggagtaaataaacatgaaaatgaaagctctatacattaaggaatgttca 18110
Query: 361 atgctagtccctcttgaaggaatttggtttaacgaactttggatcaggaacgtatctaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18109 atgctagtccctcttgaaggaatttggtttaacgaactttggatcaggaacgtatctaac 18050
Query: 421 acctttgaattgtttctccttgttatgcgtgtgctcagcaatcaaataccctaaatcgac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18049 acctttgaattgtttctccttgttatgcgtgtgctcagcaatcaaataccctaaatcgac 17990
Query: 481 taactttggccagttcacatattgaatacccctcttaaatacgaaatgtgtgcataagac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17989 taactttggccagttcacatattgaatacccctcttaaatacgaaatgtgtgcataagac 17930
Query: 541 aacaatactgaaggatccgaaaaagaaagatagattcttcgcacttgtgaaatgattctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17929 aacaatactgaaggatccgaaaaagaaagatagattcttcgcacttgtgaaatgattctt 17870
Query: 601 ggggaaaagtatagttgccatcataactgtgagggcagcgtagatcatggtaggaaccgc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17869 ggggaaaagtatagttgccatcataactgtgagggcagcgtagatcatggtaggaaccgc 17810
Query: 661 ttgaattagcattggtcttctatctgggaatggtgaatggaccacacttgcgtaaggtct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17809 ttgaattagcattggtcttctatctgggaatggtgaatggaccacacttgcgtaaggtct 17750
Query: 721 gamatttcccaggaacaaatcgaatgcatcttcccttgggccatctgtcaaattgttttg 780
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17749 gaaatttcccaggaacaaatcgaatgcatcttcccttgggccatctgtcaaattgttttg 17690
Query: 781 atagtmacgagaaatagagttaataccatcctttatagcacctaggtaagtacgtttgcc 840
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17689 atagtaacgagaaatagagttaataccatcctttatagcacctaggtaagtacgtttgcc 17630
Query: 841 agttctagtgaaatcggtcttcaatgccc 869
|||||||||||||||||||||||||||||
Sbjct: 17629 agttctagtgaaatcggtcttcaatgccc 17601
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6685
Number of Sequences: 1807
Number of extensions: 6685
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 870
length of database: 10,358,551
effective HSP length: 16
effective length of query: 854
effective length of database: 10,329,639
effective search space: 8821511706
effective search space used: 8821511706
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)